| # | Equipo | Pt | J | G | E | P | GF | GC | DG |
|---|---|---|---|---|---|---|---|---|---|
| 1 | Sapporo | 85 | 42 | 25 | 10 | 7 | 65 | 33 | 32 |
| 2 | Yamaga | 84 | 42 | 24 | 12 | 6 | 62 | 32 | 30 |
| 3 | Shimizu | 84 | 42 | 25 | 9 | 8 | 85 | 37 | 48 |
| 4 | Cerezo | 78 | 42 | 23 | 9 | 10 | 62 | 46 | 16 |
| 5 | Kyoto | 69 | 42 | 18 | 15 | 9 | 50 | 37 | 13 |
| 6 | Fagiano | 65 | 42 | 17 | 14 | 11 | 58 | 44 | 14 |
| 7 | Machida | 65 | 42 | 18 | 11 | 13 | 53 | 44 | 9 |
| 8 | Yokohama FC | 59 | 42 | 16 | 11 | 15 | 50 | 51 | -1 |
| 9 | Tokushima | 57 | 42 | 16 | 9 | 17 | 46 | 42 | 4 |
| 10 | Ehime | 56 | 42 | 12 | 20 | 10 | 41 | 40 | 1 |
| 11 | Renofa | 53 | 42 | 14 | 11 | 17 | 55 | 63 | -8 |
| 12 | JEF United | 53 | 42 | 13 | 14 | 15 | 52 | 53 | -1 |
| 13 | Mito | 48 | 42 | 10 | 18 | 14 | 45 | 49 | -4 |
| 14 | Yamagata | 47 | 42 | 11 | 14 | 17 | 43 | 49 | -6 |
| 15 | Nagasaki | 47 | 42 | 10 | 17 | 15 | 39 | 51 | -12 |
| 16 | Kumamoto | 46 | 42 | 12 | 10 | 20 | 38 | 53 | -15 |
| 17 | Kusatsu | 45 | 42 | 11 | 12 | 19 | 52 | 66 | -14 |
| 18 | Kamatamare | 43 | 42 | 10 | 13 | 19 | 43 | 62 | -19 |
| 19 | Gifu | 43 | 42 | 12 | 7 | 23 | 47 | 71 | -24 |
| 20 | Verdy | 43 | 42 | 10 | 13 | 19 | 43 | 61 | -18 |
| 21 | Kanazawa | 39 | 42 | 8 | 15 | 19 | 36 | 60 | -24 |
| 22 | Kitakyushu | 38 | 42 | 8 | 14 | 20 | 43 | 64 | -21 |